Andreas Hellander

Affiliations

Department of Information Technology, Uppsala University, Uppsala, Sweden.

ORCID: 0000-0001-7273-7923

Publications (18)

Identification of dynamic mass-action biochemical reaction networks using sparse Bayesian methods.

PLoS computational biology

Avec: Richard Jiang , Prashant Singh , Fredrik Wrede , Andreas Hellander , Linda Petzold

Living in darkness: Exploring adaptation of Proteus anguinus in 3 dimensions by X-ray imaging.

GigaScience

Avec: Markéta Tesařová , Lucia Mancini , Edgardo Mauri , Gregor Aljančič , Magdalena Năpăruş-Aljančič , Rok Kostanjšek , Lilijana Bizjak Mali , Tomáš Zikmund , Markéta Kaucká , Federica Papi , Jana Goyens , Anass Bouchnita , Andreas Hellander , Igor Adameyko , Jozef Kaiser

A multiscale model to design therapeutic strategies that overcome drug resistance to tyrosine kinase inhibitors in multiple myeloma.

Mathematical biosciences

Avec: Anass Bouchnita , Vitaly Volpert , Mark J Koury , Andreas Hellander

Smart computational exploration of stochastic gene regulatory network models using human-in-the-loop semi-supervised learning.

Bioinformatics (Oxford, England)

Avec: Fredrik Wrede , Andreas Hellander

CBMOS: a GPU-enabled Python framework for the numerical study of center-based models.

BMC bioinformatics

Avec: Sonja Mathias , Adrien Coulier , Andreas Hellander

Epidemiological modeling in StochSS Live!

Bioinformatics (Oxford, England)

Avec: Richard Jiang , Bruno Jacob , Matthew Geiger , Sean Matthew , Bryan Rumsey , Prashant Singh , Fredrik Wrede , Tau-Mu Yi , Brian Drawert , Andreas Hellander , Linda Petzold

Impact of Force Function Formulations on the Numerical Simulation of Centre-Based Models.

Bulletin of mathematical biology

Avec: Sonja Mathias , Adrien Coulier , Anass Bouchnita , Andreas Hellander

Accelerated regression-based summary statistics for discrete stochastic systems via approximate simulators.

BMC bioinformatics

Avec: Richard M Jiang , Fredrik Wrede , Prashant Singh , Andreas Hellander , Linda R Petzold

Surface flow for colonial integration in reef-building corals.

Current biology : CB

Avec: Thibault Bouderlique , Julian Petersen , Louis Faure , Daniel Abed-Navandi , Anass Bouchnita , Benjamin Mueller , Murtazo Nazarov , Lukas Englmaier , Marketa Tesarova , Pedro R Frade , Tomas Zikmund , Till Koehne , Jozef Kaiser , Kaj Fried , Christian Wild , Olga Pantos , Andreas Hellander , John Bythell , Igor Adameyko

A 3D Multiscale Model to Explore the Role of EGFR Overexpression in Tumourigenesis.

Bulletin of mathematical biology

Avec: Anass Bouchnita , Stefan Hellander , Andreas Hellander

Convolutional Neural Networks as Summary Statistics for Approximate Bayesian Computation.

IEEE/ACM transactions on computational biology and bioinformatics

Avec: Mattias AKesson , Prashant Singh , Fredrik Wrede , Andreas Hellander

A multiscale compartment-based model of stochastic gene regulatory networks using hitting-time analysis.

The Journal of chemical physics

Avec: Adrien Coulier , Stefan Hellander , Andreas Hellander

Systematic comparison of modeling fidelity levels and parameter inference settings applied to negative feedback gene regulation.

PLoS computational biology

Avec: Adrien Coulier , Prashant Singh , Marc Sturrock , Andreas Hellander

Scalable machine learning-assisted model exploration and inference using Sciope.

Bioinformatics (Oxford, England)

Avec: Prashant Singh , Fredrik Wrede , Andreas Hellander

Hierarchical algorithm for the reaction-diffusion master equation.

The Journal of chemical physics

Avec: Stefan Hellander , Andreas Hellander

Rapid development of cloud-native intelligent data pipelines for scientific data streams using the HASTE Toolkit.

GigaScience

Avec: Ben Blamey , Salman Toor , Martin Dahlö , Håkan Wieslander , Philip J Harrison , Ida-Maria Sintorn , Alan Sabirsh , Carolina Wählby , Ola Spjuth , Andreas Hellander

Contributions of cell behavior to geometric order in embryonic cartilage.

PLoS computational biology

Avec: Sonja Mathias , Igor Adameyko , Andreas Hellander , Jochen Kursawe

Altered developmental programs and oriented cell divisions lead to bulky bones during salamander limb regeneration.

Nature communications

Avec: Marketa Kaucka , Alberto Joven Araus , Marketa Tesarova , Joshua D Currie , Johan Boström , Michaela Kavkova , Julian Petersen , Zeyu Yao , Anass Bouchnita , Andreas Hellander , Tomas Zikmund , Ahmed Elewa , Phillip T Newton , Ji-Feng Fei , Andrei S Chagin , Kaj Fried , Elly M Tanaka , Jozef Kaiser , András Simon , Igor Adameyko

Réseau de co-auteurs

Prashant Singh 6 collaborations

Fredrik Wrede 6 collaborations

Anass Bouchnita 6 collaborations

Igor Adameyko 4 collaborations

Adrien Coulier 4 collaborations

Jozef Kaiser 3 collaborations

Sonja Mathias 3 collaborations

Stefan Hellander 3 collaborations

Richard Jiang 2 collaborations

Linda Petzold 2 collaborations

Julian Petersen 2 collaborations

Marketa Tesarova 2 collaborations

Tomas Zikmund 2 collaborations

Kaj Fried 2 collaborations

Markéta Tesařová 1 collaboration

Lucia Mancini 1 collaboration

Edgardo Mauri 1 collaboration

Gregor Aljančič 1 collaboration

Magdalena Năpăruş-Aljančič 1 collaboration

Rok Kostanjšek 1 collaboration

Lilijana Bizjak Mali 1 collaboration

Tomáš Zikmund 1 collaboration

Markéta Kaucká 1 collaboration

Federica Papi 1 collaboration

Jana Goyens 1 collaboration

Vitaly Volpert 1 collaboration

Mark J Koury 1 collaboration

Bruno Jacob 1 collaboration

Matthew Geiger 1 collaboration

Sean Matthew 1 collaboration

Bryan Rumsey 1 collaboration

Tau-Mu Yi 1 collaboration

Brian Drawert 1 collaboration

Richard M Jiang 1 collaboration

Linda R Petzold 1 collaboration

Thibault Bouderlique 1 collaboration

Louis Faure 1 collaboration

Daniel Abed-Navandi 1 collaboration

Benjamin Mueller 1 collaboration

Murtazo Nazarov 1 collaboration

Lukas Englmaier 1 collaboration

Pedro R Frade 1 collaboration

Till Koehne 1 collaboration

Christian Wild 1 collaboration

Olga Pantos 1 collaboration

John Bythell 1 collaboration

Mattias AKesson 1 collaboration

Marc Sturrock 1 collaboration

Ben Blamey 1 collaboration

Salman Toor 1 collaboration

Martin Dahlö 1 collaboration

Håkan Wieslander 1 collaboration

Philip J Harrison 1 collaboration

Ida-Maria Sintorn 1 collaboration

Alan Sabirsh 1 collaboration

Carolina Wählby 1 collaboration

Ola Spjuth 1 collaboration

Jochen Kursawe 1 collaboration

Marketa Kaucka 1 collaboration

Alberto Joven Araus 1 collaboration

Joshua D Currie 1 collaboration

Johan Boström 1 collaboration

Michaela Kavkova 1 collaboration

Zeyu Yao 1 collaboration

Ahmed Elewa 1 collaboration

Phillip T Newton 1 collaboration

Ji-Feng Fei 1 collaboration

Andrei S Chagin 1 collaboration

Elly M Tanaka 1 collaboration

András Simon 1 collaboration